epbd_bert.utility package

Contents

epbd_bert.utility package#

Submodules#

epbd_bert.utility.data_utils module#

epbd_bert.utility.data_utils.compute_multi_class_weights(home_dir='')[source]#

epbd_bert.utility.data_utils.get_uniform_peaks_metadata(home_dir='/usr/projects/pyDNA_EPBD/tf_dna_binding/')[source]#

epbd_bert.utility.dnabert2 module#

epbd_bert.utility.dnabert2.get_dnabert2_pretrained_model(home_dir='')[source]#

epbd_bert.utility.dnabert2.get_dnabert2_tokenizer(max_num_tokens=512, home_dir='')[source]#

epbd_bert.utility.dnabert2.load_dnabert2_for_classification(num_labels, home_dir='')[source]#

epbd_bert.utility.pickle_utils module#

epbd_bert.utility.pickle_utils.load(path)[source]#

epbd_bert.utility.pickle_utils.save(data, path)[source]#

Module contents#