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Ingest and stack variables needed in calibration.

Source: R/restructure_data.R
ingest_data.Rd

Opens and stacks isotope ratio and water/carbon dioxide mole fraction variables from monthly HDF5 files. If a new enough version of neonUtilities is available, this function will try to use fasttime in order to accelerate data stacking.

Usage

ingest_data(inname, analyte, name_fix = TRUE, amb_avg, ref_avg)

Arguments

inname

A file (or list of files) to extract data from for calibration.

analyte

Carbon (Co2) or water (H2o)?

name_fix

Fix to data frame required for next-generation calibration functions, but breaks old 'by_month()' functions. This parameter provides a necessary work around until these functions are removed.

amb_avg

The averaging interval of the ambient data to extract.

ref_avg

The averaging interval of the reference data to extract.

Value

List of data frames, taken from files specified in inname

Author

Rich Fiorella rfiorella@lanl.gov