TELF package

Subpackages

• TELF.factorization package
  • Subpackages
    • TELF.factorization.decompositions package
      • Subpackages
        • TELF.factorization.decompositions.utilities package
          • Submodules
          • TELF.factorization.decompositions.utilities.bool_clustering module
          • TELF.factorization.decompositions.utilities.bool_noise module
          • TELF.factorization.decompositions.utilities.clustering module
            • custom_bool_clustering()
            • custom_k_means()
          • TELF.factorization.decompositions.utilities.concensus_matrix module
            • compute_connectivity_mat()
            • compute_consensus_matrix()
            • reorder_con_mat()
          • TELF.factorization.decompositions.utilities.data_reshaping module
            • fold()
            • move_axis()
            • unfold()
          • TELF.factorization.decompositions.utilities.generic_utils module
            • bary_proj()
            • get_cupyx()
            • get_np()
            • get_scipy()
            • grid_eval()
            • update_opts()
          • TELF.factorization.decompositions.utilities.math_utils module
            • bary_coords()
            • fro_norm()
            • get_pac()
            • kl_divergence()
            • masked_nmf()
            • nan_to_num()
            • norm_X()
            • nz_indices()
            • prune()
            • relative_error()
            • relative_error_rescal()
            • relative_trinmf_error()
            • sparse_divide_product()
            • sparse_dot_product()
            • unprune()
          • TELF.factorization.decompositions.utilities.nnsvd module
            • nnsvd()
          • TELF.factorization.decompositions.utilities.resample module
            • boolean()
            • poisson()
            • uniform_product()
          • TELF.factorization.decompositions.utilities.silhouettes module
            • silhouettes()
            • silhouettes_with_distance()
          • Module contents
      • Submodules
      • TELF.factorization.decompositions.nmf_fro_admm module
        • H_update()
        • W_update()
        • nmf()
      • TELF.factorization.decompositions.nmf_fro_mu module
        • H_update()
        • W_update()
        • nmf()
      • TELF.factorization.decompositions.nmf_kl_admm module
        • H_update()
        • W_update()
        • nmf()
      • TELF.factorization.decompositions.nmf_kl_mu module
        • H_update()
        • W_update()
        • nmf()
      • TELF.factorization.decompositions.nmf_mc_fro_mu module
        • H_update_ADMM()
        • H_update_MU()
        • W_update_ADMM()
        • W_update_MU()
        • coord_desc_thresh()
        • coord_desc_thresh_onefactor()
        • find_thres_WH()
        • nmf()
        • nmf_with_ADMM()
        • old_find_thres_WH()
        • old_nmf()
        • roc_W_H()
        • thres_norm()
      • TELF.factorization.decompositions.rescal_fro_mu module
        • A_update()
        • R_update()
        • rescal()
      • TELF.factorization.decompositions.tri_nmf_fro_mu module
        • H_update()
        • S_update()
        • W_update()
        • trinmf()
      • Module contents
    • TELF.factorization.utilities package
      • Submodules
      • TELF.factorization.utilities.clustering module
        • H_clustering()
        • plot_H_clustering()
      • TELF.factorization.utilities.co_occurance_matrix module
        • co_occurrence()
      • TELF.factorization.utilities.organize_n_jobs module
        • organize_devices()
        • organize_n_jobs()
      • TELF.factorization.utilities.plot_NMFk module
        • plot_BNMFk()
        • plot_NMFk()
        • plot_RESCALk()
        • plot_SymNMFk()
        • plot_consensus_mat()
        • plot_cophenetic_coeff()
      • TELF.factorization.utilities.pvalue_analysis module
        • pvalue_analysis()
      • TELF.factorization.utilities.sppmi_matrix module
        • sppmi()
      • TELF.factorization.utilities.take_note module
        • append_to_note()
        • format_note()
        • take_note()
        • take_note_fmat()
      • TELF.factorization.utilities.vectorize module
        • count()
        • tfidf()
      • Module contents
  • Submodules
  • TELF.factorization.NMFk module
    • NMFk
      • NMFk.fit()
  • TELF.factorization.RESCALk module
    • RESCALk
      • RESCALk.fit()
  • TELF.factorization.TriNMFk module
    • TriNMFk
      • TriNMFk.fit_nmfk()
      • TriNMFk.fit_tri_nmfk()
  • Module contents
• TELF.pre_processing package
  • Subpackages
    • TELF.pre_processing.Beaver package
      • Submodules
      • TELF.pre_processing.Beaver.beaver module
        • Beaver
          • Beaver.SUPPORTED_OUTPUT_FORMATS
          • Beaver.citation_tensor()
          • Beaver.coauthor_tensor()
          • Beaver.cocitation_tensor()
          • Beaver.cooccurrence_matrix()
          • Beaver.documents_words()
          • Beaver.get_ngrams()
          • Beaver.get_vocabulary()
          • Beaver.n_jobs
          • Beaver.n_nodes
          • Beaver.participation_tensor()
          • Beaver.something_words()
          • Beaver.something_words_time()
      • TELF.pre_processing.Beaver.cooccurrence module
        • co_occurrence()
      • TELF.pre_processing.Beaver.sppmi module
        • sppmi()
      • TELF.pre_processing.Beaver.tenmat module
        • fold()
        • unfold()
      • TELF.pre_processing.Beaver.vectorize module
        • count()
        • tfidf()
      • Module contents
    • TELF.pre_processing.Vulture package
      • Subpackages
        • TELF.pre_processing.Vulture.tokens_analysis package
          • Submodules
          • TELF.pre_processing.Vulture.tokens_analysis.top_words module
            • get_top_words()
          • Module contents
      • Submodules
      • TELF.pre_processing.Vulture.modules module
      • TELF.pre_processing.Vulture.vulture module
        • Vulture
          • Vulture.DEFAULT_OPERATOR_PIPELINE
          • Vulture.DEFAULT_PIPELINE
          • Vulture.PARALLEL_BACKEND_OPTIONS
          • Vulture.cache
          • Vulture.clean()
          • Vulture.clean_dataframe()
          • Vulture.n_jobs
          • Vulture.n_nodes
          • Vulture.operate()
          • Vulture.parallel_backend
          • Vulture.save_path
          • Vulture.use_mpi()
          • Vulture.verbose
        • chunk_tuple_list()
      • Module contents
  • Module contents

Submodules

TELF.version module

Module contents