Index

A

A_update() (in module TELF.factorization.decompositions.rescal_fro_mu) add_Bool_noise() (in module TELF.factorization.decompositions.utilities.bool_noise)

add_Bool_posneg_noise() (in module TELF.factorization.decompositions.utilities.bool_noise) add_with_union_of_others() (in module TELF.applications.Cheetah.cheetah) append_to_note() (in module TELF.factorization.utilities.take_note)

B

bary_coords() (in module TELF.factorization.decompositions.utilities.math_utils)

bary_proj() (in module TELF.factorization.decompositions.utilities.generic_utils) Beaver (class in TELF.pre_processing.Beaver.beaver), [1]

C

cache (TELF.pre_processing.Vulture.vulture.Vulture property), [1] Cheetah (class in TELF.applications.Cheetah.cheetah) chunk_tuple_list() (in module TELF.pre_processing.Vulture.vulture), [1] citation_tensor() (TELF.pre_processing.Beaver.beaver.Beaver method), [1] clean() (TELF.pre_processing.Vulture.vulture.Vulture method), [1] clean_dataframe() (TELF.pre_processing.Vulture.vulture.Vulture method), [1] co_occurrence() (in module TELF.factorization.utilities.co_occurance_matrix) (in module TELF.pre_processing.Beaver.cooccurrence) coauthor_tensor() (TELF.pre_processing.Beaver.beaver.Beaver method), [1] cocitation_tensor() (TELF.pre_processing.Beaver.beaver.Beaver method), [1] COLUMNS (TELF.applications.Cheetah.cheetah.Cheetah attribute)

columns (TELF.applications.Cheetah.cheetah.Cheetah property) compute_connectivity_mat() (in module TELF.factorization.decompositions.utilities.concensus_matrix) compute_consensus_matrix() (in module TELF.factorization.decompositions.utilities.concensus_matrix) cooccurrence_matrix() (TELF.pre_processing.Beaver.beaver.Beaver method), [1] coord_desc_thresh() (in module TELF.factorization.decompositions.nmf_mc_fro_mu) coord_desc_thresh_onefactor() (in module TELF.factorization.decompositions.nmf_mc_fro_mu) count() (in module TELF.factorization.utilities.vectorize) (in module TELF.pre_processing.Beaver.vectorize) custom_bool_clustering() (in module TELF.factorization.decompositions.utilities.bool_clustering) custom_k_means() (in module TELF.factorization.decompositions.utilities.clustering) custom_silhouettes() (in module TELF.factorization.decompositions.utilities.silhouettes)

D

DEFAULT_OPERATOR_PIPELINE (TELF.pre_processing.Vulture.vulture.Vulture attribute), [1]

DEFAULT_PIPELINE (TELF.pre_processing.Vulture.vulture.Vulture attribute), [1] documents_words() (TELF.pre_processing.Beaver.beaver.Beaver method), [1]

F

find_ngram() (TELF.applications.Cheetah.cheetah.Cheetah class method) find_thres_WH() (in module TELF.factorization.decompositions.nmf_mc_fro_mu) fit() (TELF.factorization.HNMFk.HNMFk method) (TELF.factorization.NMFk.NMFk method), [1] (TELF.factorization.RESCALk.RESCALk method), [1] (TELF.factorization.SymNMFk.SymNMFk method)

fit_nmfk() (TELF.factorization.TriNMFk.TriNMFk method), [1] fit_tri_nmfk() (TELF.factorization.TriNMFk.TriNMFk method), [1] fold() (in module TELF.factorization.decompositions.utilities.data_reshaping) (in module TELF.pre_processing.Beaver.tenmat) format_note() (in module TELF.factorization.utilities.take_note) fro_norm() (in module TELF.factorization.decompositions.utilities.math_utils)

G

get_cupyx() (in module TELF.factorization.decompositions.utilities.generic_utils) get_ngrams() (TELF.pre_processing.Beaver.beaver.Beaver method), [1] get_node() (TELF.factorization.HNMFk.HNMFk method) get_np() (in module TELF.factorization.decompositions.utilities.generic_utils) get_pac() (in module TELF.factorization.decompositions.utilities.math_utils) get_scipy() (in module TELF.factorization.decompositions.utilities.generic_utils)

get_top_words() (in module TELF.pre_processing.Vulture.tokens_analysis.top_words) get_vocabulary() (TELF.pre_processing.Beaver.beaver.Beaver method), [1] go_to_children() (TELF.factorization.HNMFk.HNMFk method) go_to_parent() (TELF.factorization.HNMFk.HNMFk method) go_to_root() (TELF.factorization.HNMFk.HNMFk method) grid_eval() (in module TELF.factorization.decompositions.utilities.generic_utils)

H

H_clustering() (in module TELF.factorization.utilities.clustering) H_update() (in module TELF.factorization.decompositions.nmf_fro_admm) (in module TELF.factorization.decompositions.nmf_fro_mu) (in module TELF.factorization.decompositions.nmf_kl_admm) (in module TELF.factorization.decompositions.nmf_kl_mu) (in module TELF.factorization.decompositions.tri_nmf_fro_mu)

H_update_ADMM() (in module TELF.factorization.decompositions.nmf_mc_fro_mu) H_update_MU() (in module TELF.factorization.decompositions.nmf_mc_fro_mu) HNMFk (class in TELF.factorization.HNMFk)

I

index() (TELF.applications.Cheetah.cheetah.Cheetah method)

K

kl_divergence() (in module TELF.factorization.decompositions.utilities.math_utils)

M

masked_nmf() (in module TELF.factorization.decompositions.utilities.math_utils) module TELF TELF.applications.Cheetah.cheetah TELF.factorization TELF.factorization.decompositions TELF.factorization.decompositions.nmf_fro_admm TELF.factorization.decompositions.nmf_fro_mu TELF.factorization.decompositions.nmf_kl_admm TELF.factorization.decompositions.nmf_kl_mu TELF.factorization.decompositions.nmf_mc_fro_mu TELF.factorization.decompositions.rescal_fro_mu TELF.factorization.decompositions.tri_nmf_fro_mu TELF.factorization.decompositions.utilities TELF.factorization.decompositions.utilities.bool_clustering TELF.factorization.decompositions.utilities.bool_noise TELF.factorization.decompositions.utilities.clustering TELF.factorization.decompositions.utilities.concensus_matrix TELF.factorization.decompositions.utilities.data_reshaping TELF.factorization.decompositions.utilities.generic_utils TELF.factorization.decompositions.utilities.math_utils TELF.factorization.decompositions.utilities.nnsvd TELF.factorization.decompositions.utilities.resample TELF.factorization.decompositions.utilities.silhouettes TELF.factorization.HNMFk TELF.factorization.NMFk, [1] TELF.factorization.RESCALk, [1] TELF.factorization.SymNMFk TELF.factorization.TriNMFk, [1] TELF.factorization.utilities TELF.factorization.utilities.clustering TELF.factorization.utilities.co_occurance_matrix TELF.factorization.utilities.organize_n_jobs TELF.factorization.utilities.plot_NMFk TELF.factorization.utilities.pvalue_analysis TELF.factorization.utilities.sppmi_matrix TELF.factorization.utilities.take_note TELF.factorization.utilities.vectorize TELF.pre_processing TELF.pre_processing.Beaver TELF.pre_processing.Beaver.beaver, [1] TELF.pre_processing.Beaver.cooccurrence TELF.pre_processing.Beaver.sppmi TELF.pre_processing.Beaver.tenmat TELF.pre_processing.Beaver.vectorize TELF.pre_processing.Vulture TELF.pre_processing.Vulture.modules TELF.pre_processing.Vulture.tokens_analysis TELF.pre_processing.Vulture.tokens_analysis.top_words TELF.pre_processing.Vulture.vulture, [1] TELF.version

move_axis() (in module TELF.factorization.decompositions.utilities.data_reshaping)

N

n_jobs (TELF.pre_processing.Beaver.beaver.Beaver property), [1] (TELF.pre_processing.Vulture.vulture.Vulture property), [1] n_nodes (TELF.pre_processing.Beaver.beaver.Beaver property), [1] (TELF.pre_processing.Vulture.vulture.Vulture property), [1] nan_to_num() (in module TELF.factorization.decompositions.utilities.math_utils) ngram_ordered (TELF.applications.Cheetah.cheetah.Cheetah property) ngram_window_size (TELF.applications.Cheetah.cheetah.Cheetah property) nmf() (in module TELF.factorization.decompositions.nmf_fro_admm) (in module TELF.factorization.decompositions.nmf_fro_mu) (in module TELF.factorization.decompositions.nmf_kl_admm) (in module TELF.factorization.decompositions.nmf_kl_mu) (in module TELF.factorization.decompositions.nmf_mc_fro_mu)

nmf_with_ADMM() (in module TELF.factorization.decompositions.nmf_mc_fro_mu) NMFk (class in TELF.factorization.NMFk), [1] nnsvd() (in module TELF.factorization.decompositions.utilities.nnsvd) Node (class in TELF.factorization.HNMFk) norm_X() (in module TELF.factorization.decompositions.utilities.math_utils) nz_indices() (in module TELF.factorization.decompositions.utilities.math_utils)

O

old_find_thres_WH() (in module TELF.factorization.decompositions.nmf_mc_fro_mu) old_nmf() (in module TELF.factorization.decompositions.nmf_mc_fro_mu)

OnlineNode (class in TELF.factorization.HNMFk) operate() (TELF.pre_processing.Vulture.vulture.Vulture method), [1] organize_n_jobs() (in module TELF.factorization.utilities.organize_n_jobs)

P

parallel_backend (TELF.pre_processing.Vulture.vulture.Vulture property), [1] PARALLEL_BACKEND_OPTIONS (TELF.pre_processing.Vulture.vulture.Vulture attribute), [1] participation_tensor() (TELF.pre_processing.Beaver.beaver.Beaver method), [1] plot_BNMFk() (in module TELF.factorization.utilities.plot_NMFk) plot_consensus_mat() (in module TELF.factorization.utilities.plot_NMFk) plot_cophenetic_coeff() (in module TELF.factorization.utilities.plot_NMFk)

plot_H_clustering() (in module TELF.factorization.utilities.clustering) plot_NMFk() (in module TELF.factorization.utilities.plot_NMFk) plot_RESCALk() (in module TELF.factorization.utilities.plot_NMFk) plot_SymNMFk() (in module TELF.factorization.utilities.plot_NMFk) poisson() (in module TELF.factorization.decompositions.utilities.resample) prune() (in module TELF.factorization.decompositions.utilities.math_utils) pvalue_analysis() (in module TELF.factorization.utilities.pvalue_analysis)

Q

query (TELF.applications.Cheetah.cheetah.Cheetah property)

R

R_update() (in module TELF.factorization.decompositions.rescal_fro_mu) relative_error() (in module TELF.factorization.decompositions.utilities.math_utils) relative_error_rescal() (in module TELF.factorization.decompositions.utilities.math_utils) relative_trinmf_error() (in module TELF.factorization.decompositions.utilities.math_utils)

reorder_con_mat() (in module TELF.factorization.decompositions.utilities.concensus_matrix) rescal() (in module TELF.factorization.decompositions.rescal_fro_mu) RESCALk (class in TELF.factorization.RESCALk), [1] roc_W_H() (in module TELF.factorization.decompositions.nmf_mc_fro_mu)

S

S_update() (in module TELF.factorization.decompositions.tri_nmf_fro_mu) save_path (TELF.pre_processing.Vulture.vulture.Vulture property), [1] search() (TELF.applications.Cheetah.cheetah.Cheetah method) silhouettes() (in module TELF.factorization.decompositions.utilities.clustering) something_words() (TELF.pre_processing.Beaver.beaver.Beaver method), [1] something_words_time() (TELF.pre_processing.Beaver.beaver.Beaver method), [1]

sparse_divide_product() (in module TELF.factorization.decompositions.utilities.math_utils) sparse_dot_product() (in module TELF.factorization.decompositions.utilities.math_utils) sppmi() (in module TELF.factorization.utilities.sppmi_matrix) (in module TELF.pre_processing.Beaver.sppmi) SUPPORTED_OUTPUT_FORMATS (TELF.pre_processing.Beaver.beaver.Beaver attribute), [1] SymNMFk (class in TELF.factorization.SymNMFk)

T

take_note() (in module TELF.factorization.utilities.take_note) take_note_fmat() (in module TELF.factorization.utilities.take_note) TELF module TELF.applications.Cheetah.cheetah module TELF.factorization module TELF.factorization.decompositions module TELF.factorization.decompositions.nmf_fro_admm module TELF.factorization.decompositions.nmf_fro_mu module TELF.factorization.decompositions.nmf_kl_admm module TELF.factorization.decompositions.nmf_kl_mu module TELF.factorization.decompositions.nmf_mc_fro_mu module TELF.factorization.decompositions.rescal_fro_mu module TELF.factorization.decompositions.tri_nmf_fro_mu module TELF.factorization.decompositions.utilities module TELF.factorization.decompositions.utilities.bool_clustering module TELF.factorization.decompositions.utilities.bool_noise module TELF.factorization.decompositions.utilities.clustering module TELF.factorization.decompositions.utilities.concensus_matrix module TELF.factorization.decompositions.utilities.data_reshaping module TELF.factorization.decompositions.utilities.generic_utils module TELF.factorization.decompositions.utilities.math_utils module TELF.factorization.decompositions.utilities.nnsvd module TELF.factorization.decompositions.utilities.resample module TELF.factorization.decompositions.utilities.silhouettes module TELF.factorization.HNMFk module TELF.factorization.NMFk module, [1] TELF.factorization.RESCALk module, [1] TELF.factorization.SymNMFk module

TELF.factorization.TriNMFk module, [1] TELF.factorization.utilities module TELF.factorization.utilities.clustering module TELF.factorization.utilities.co_occurance_matrix module TELF.factorization.utilities.organize_n_jobs module TELF.factorization.utilities.plot_NMFk module TELF.factorization.utilities.pvalue_analysis module TELF.factorization.utilities.sppmi_matrix module TELF.factorization.utilities.take_note module TELF.factorization.utilities.vectorize module TELF.pre_processing module TELF.pre_processing.Beaver module TELF.pre_processing.Beaver.beaver module, [1] TELF.pre_processing.Beaver.cooccurrence module TELF.pre_processing.Beaver.sppmi module TELF.pre_processing.Beaver.tenmat module TELF.pre_processing.Beaver.vectorize module TELF.pre_processing.Vulture module TELF.pre_processing.Vulture.modules module TELF.pre_processing.Vulture.tokens_analysis module TELF.pre_processing.Vulture.tokens_analysis.top_words module TELF.pre_processing.Vulture.vulture module, [1] TELF.version module tfidf() (in module TELF.factorization.utilities.vectorize) (in module TELF.pre_processing.Beaver.vectorize) thres_norm() (in module TELF.factorization.decompositions.nmf_mc_fro_mu) traverse_nodes() (TELF.factorization.HNMFk.HNMFk method) trinmf() (in module TELF.factorization.decompositions.tri_nmf_fro_mu) TriNMFk (class in TELF.factorization.TriNMFk), [1]

U

unfold() (in module TELF.factorization.decompositions.utilities.data_reshaping) (in module TELF.pre_processing.Beaver.tenmat) uniform_product() (in module TELF.factorization.decompositions.utilities.resample)

unprune() (in module TELF.factorization.decompositions.utilities.math_utils) update_opts() (in module TELF.factorization.decompositions.utilities.generic_utils) use_mpi() (TELF.pre_processing.Vulture.vulture.Vulture method), [1]

V

verbose (TELF.pre_processing.Vulture.vulture.Vulture property), [1]

Vulture (class in TELF.pre_processing.Vulture.vulture), [1]

W

W_update() (in module TELF.factorization.decompositions.nmf_fro_admm) (in module TELF.factorization.decompositions.nmf_fro_mu) (in module TELF.factorization.decompositions.nmf_kl_admm) (in module TELF.factorization.decompositions.nmf_kl_mu) (in module TELF.factorization.decompositions.tri_nmf_fro_mu)

W_update_ADMM() (in module TELF.factorization.decompositions.nmf_mc_fro_mu) W_update_MU() (in module TELF.factorization.decompositions.nmf_mc_fro_mu)