Index

_

__init__() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.gufi.Gufi method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.rcsbpdb.RCSBPDB method) (dsi.backends.sqlite.Sqlite method) (dsi.backends.zenodo.Zenodo method) (dsi.core.Terminal method) (dsi.dsi.DSI method) (dsi.plugins.collection_reader.Dataframe method) (dsi.plugins.collection_reader.Dictionary method) (dsi.plugins.env.Environment method) (dsi.plugins.env.GitInfo method) (dsi.plugins.env.Hostname method) (dsi.plugins.env.SystemKernel method) (dsi.plugins.file_reader.Bueno method) (dsi.plugins.file_reader.Cloverleaf method) (dsi.plugins.file_reader.Csv method) (dsi.plugins.file_reader.DublinCoreDatacard method) (dsi.plugins.file_reader.Ensemble method) (dsi.plugins.file_reader.GenesisDatacard method) (dsi.plugins.file_reader.GoogleDatacard method) (dsi.plugins.file_reader.JSON method) (dsi.plugins.file_reader.Parquet method) (dsi.plugins.file_reader.Schema method) (dsi.plugins.file_reader.SchemaOrgDatacard method) (dsi.plugins.file_reader.TOML method) (dsi.plugins.file_reader.TOML1 method) (dsi.plugins.file_reader.YAML method) (dsi.plugins.file_reader.YAML1 method) (dsi.plugins.file_writer.Csv_Writer method) (dsi.plugins.file_writer.ER_Diagram method) (dsi.plugins.file_writer.Parquet_Writer method) (dsi.plugins.file_writer.Table_Plot method) (dsi.plugins.metadata.StructuredMetadata method) (dsi.plugins.plugin.Plugin method) (dsi.sync.Sync method)

A

add_external_python_module() (dsi.core.Terminal method) add_rows() (dsi.plugins.collection_reader.Dataframe method) (dsi.plugins.collection_reader.Dictionary method) (dsi.plugins.env.GitInfo method) (dsi.plugins.env.Hostname method) (dsi.plugins.env.SystemKernel method) (dsi.plugins.file_reader.Bueno method) (dsi.plugins.file_reader.Cloverleaf method) (dsi.plugins.file_reader.Csv method) (dsi.plugins.file_reader.DublinCoreDatacard method) (dsi.plugins.file_reader.Ensemble method) (dsi.plugins.file_reader.GenesisDatacard method) (dsi.plugins.file_reader.GoogleDatacard method) (dsi.plugins.file_reader.JSON method) (dsi.plugins.file_reader.Parquet method) (dsi.plugins.file_reader.Schema method) (dsi.plugins.file_reader.SchemaOrgDatacard method) (dsi.plugins.file_reader.TOML method) (dsi.plugins.file_reader.TOML1 method) (dsi.plugins.file_reader.YAML method) (dsi.plugins.file_reader.YAML1 method)

add_to_output() (dsi.plugins.metadata.StructuredMetadata method) (dsi.plugins.plugin.Plugin method) artifact_handler() (dsi.core.Terminal method)

B

Bueno (class in dsi.plugins.file_reader)

C

change_group() (dsi.sync.Sync method) change_permissions() (dsi.sync.Sync method) check_table_relations() (dsi.backends.duckdb.DuckDB method) classify_usability() (dsi.backends.rcsbpdb.RCSBPDB static method) close() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.rcsbpdb.RCSBPDB method) (dsi.backends.sqlite.Sqlite method) (dsi.core.Terminal method) (dsi.dsi.DSI method)

Cloverleaf (class in dsi.plugins.file_reader) copy() (dsi.sync.Sync method) create_dynamic_model() (in module dsi.plugins.plugin_models) Csv (class in dsi.plugins.file_reader) Csv_Writer (class in dsi.plugins.file_writer)

D

Dataframe (class in dsi.plugins.collection_reader) Denodo (class in dsi.backends.denodo) Dictionary (class in dsi.plugins.collection_reader) dircrawl() (dsi.sync.Sync method) display() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.rcsbpdb.RCSBPDB method) (dsi.backends.sqlite.Sqlite method) (dsi.core.Terminal method) (dsi.dsi.DSI method) DSI (class in dsi.dsi) dsi.backends.denodo module dsi.backends.duckdb module dsi.backends.gufi module dsi.backends.ndp module dsi.backends.oceans11 module

dsi.backends.osti module dsi.backends.rcsbpdb module dsi.backends.sqlite module dsi.backends.zenodo module dsi.plugins.collection_reader module dsi.plugins.env module dsi.plugins.file_reader module dsi.plugins.file_writer module dsi.plugins.metadata module dsi.plugins.plugin module dsi.plugins.plugin_models module DublinCoreDatacard (class in dsi.plugins.file_reader) DuckDB (class in dsi.backends.duckdb)

E

Ensemble (class in dsi.plugins.file_reader) Environment (class in dsi.plugins.env) EnvironmentModel (class in dsi.plugins.plugin_models)

ER_Diagram (class in dsi.plugins.file_writer) execute_cmd() (dsi.sync.Sync method) extract_yaml_block() (dsi.plugins.file_reader.GenesisDatacard method)

F

find() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.rcsbpdb.RCSBPDB method) (dsi.backends.sqlite.Sqlite method) (dsi.backends.zenodo.Zenodo method) (dsi.core.Terminal method) (dsi.dsi.DSI method) find_cell() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.rcsbpdb.RCSBPDB method) (dsi.backends.sqlite.Sqlite method) (dsi.backends.zenodo.Zenodo method) (dsi.core.Terminal method) find_column() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.sqlite.Sqlite method) (dsi.backends.zenodo.Zenodo method) (dsi.core.Terminal method)

find_helper() (dsi.core.Terminal method) find_relation() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.rcsbpdb.RCSBPDB method) (dsi.backends.sqlite.Sqlite method) (dsi.backends.zenodo.Zenodo method) (dsi.core.Terminal method) find_table() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.sqlite.Sqlite method) (dsi.backends.zenodo.Zenodo method) (dsi.core.Terminal method)

G

gen_uuid() (dsi.sync.Sync method) GenesisDatacard (class in dsi.plugins.file_reader) GenesisDatacard.DataCardSchema (class in dsi.plugins.file_reader) get() (dsi.sync.Sync method) get_cmd_output() (dsi.plugins.env.SystemKernel static method) get_current_abstraction() (dsi.core.Terminal method) get_kernel_bt_config() (dsi.plugins.env.SystemKernel method) get_kernel_ct_config() (dsi.plugins.env.SystemKernel method) get_kernel_mod_config() (dsi.plugins.env.SystemKernel method) get_kernel_rt_config() (dsi.plugins.env.SystemKernel method) get_kernel_version() (dsi.plugins.env.SystemKernel method) get_prov_info() (dsi.plugins.env.SystemKernel method) get_rows() (dsi.plugins.file_writer.Csv_Writer method) (dsi.plugins.file_writer.ER_Diagram method) (dsi.plugins.file_writer.Parquet_Writer method) (dsi.plugins.file_writer.Table_Plot method) get_schema() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.rcsbpdb.RCSBPDB method) (dsi.backends.sqlite.Sqlite method) (dsi.core.Terminal method)

get_sql_query_table_name() (dsi.backends.duckdb.DuckDB method) (dsi.backends.sqlite.Sqlite method) get_table() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.sqlite.Sqlite method) (dsi.core.Terminal method) (dsi.dsi.DSI method) get_tag_value() (dsi.plugins.file_reader.GenesisDatacard method) GitInfo (class in dsi.plugins.env) GitInfoModel (class in dsi.plugins.plugin_models) GoogleDatacard (class in dsi.plugins.file_reader) graphviz_name() (dsi.plugins.file_writer.ER_Diagram method) Gufi (class in dsi.backends.gufi) gufi_query_index() (dsi.sync.Sync method)

H

Hostname (class in dsi.plugins.env)

HostnameModel (class in dsi.plugins.plugin_models)

I

index() (dsi.sync.Sync method) ingest_artifacts() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.sqlite.Sqlite method) (dsi.backends.zenodo.Zenodo method)

ingest_table_helper() (dsi.backends.duckdb.DuckDB method) (dsi.backends.sqlite.Sqlite method)

J

JSON (class in dsi.plugins.file_reader)

L

list() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.sqlite.Sqlite method) (dsi.core.Terminal method) (dsi.dsi.DSI method)

list_available_modules() (dsi.core.Terminal method) list_backends() (dsi.dsi.DSI method) list_loaded_modules() (dsi.core.Terminal method) list_readers() (dsi.dsi.DSI method) list_writers() (dsi.dsi.DSI method) load_module() (dsi.core.Terminal method)

M

model_config (dsi.plugins.file_reader.GenesisDatacard.DataCardSchema attribute) (dsi.plugins.plugin_models.EnvironmentModel attribute) (dsi.plugins.plugin_models.GitInfoModel attribute) (dsi.plugins.plugin_models.HostnameModel attribute) (dsi.plugins.plugin_models.SystemKernelModel attribute) module dsi.backends.denodo dsi.backends.duckdb dsi.backends.gufi dsi.backends.ndp dsi.backends.oceans11 dsi.backends.osti dsi.backends.rcsbpdb dsi.backends.sqlite dsi.backends.zenodo dsi.plugins.collection_reader dsi.plugins.env dsi.plugins.file_reader dsi.plugins.file_writer dsi.plugins.metadata dsi.plugins.plugin dsi.plugins.plugin_models

N

NDP (class in dsi.backends.ndp) notebook() (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.rcsbpdb.RCSBPDB method) (dsi.backends.sqlite.Sqlite method) (dsi.backends.zenodo.Zenodo method)

num_tables() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.sqlite.Sqlite method) (dsi.core.Terminal method) (dsi.dsi.DSI method)

O

Oceans11 (class in dsi.backends.oceans11) OSTI (class in dsi.backends.osti)

overwrite_table() (dsi.backends.duckdb.DuckDB method) (dsi.backends.sqlite.Sqlite method) (dsi.core.Terminal method)

P

pack_header() (dsi.plugins.env.GitInfo method) (dsi.plugins.env.Hostname method) (dsi.plugins.env.SystemKernel method) Parquet (class in dsi.plugins.file_reader) Parquet_Writer (class in dsi.plugins.file_writer) parse_datacard() (dsi.plugins.file_reader.GenesisDatacard method) Plugin (class in dsi.plugins.plugin)

process() (dsi.dsi.DSI method) process_artifacts() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.sqlite.Sqlite method)

Q

query() (dsi.dsi.DSI method) query_artifacts() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.gufi.Gufi method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.sqlite.Sqlite method)

R

RCSBPDB (class in dsi.backends.rcsbpdb)

read() (dsi.dsi.DSI method)

S

Schema (class in dsi.plugins.file_reader) schema() (dsi.dsi.DSI method) schema_is_set() (dsi.plugins.metadata.StructuredMetadata method) SchemaOrgDatacard (class in dsi.plugins.file_reader) search() (dsi.backends.denodo.Denodo method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.rcsbpdb.RCSBPDB method) (dsi.backends.zenodo.Zenodo method) (dsi.core.Terminal method) (dsi.dsi.DSI method) set_schema() (dsi.plugins.metadata.StructuredMetadata method) set_schema_2() (dsi.plugins.metadata.StructuredMetadata method) sql_type() (dsi.backends.duckdb.DuckDB method) (dsi.backends.sqlite.Sqlite method)

Sqlite (class in dsi.backends.sqlite) StructuredMetadata (class in dsi.plugins.metadata) summary() (dsi.backends.denodo.Denodo method) (dsi.backends.duckdb.DuckDB method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.sqlite.Sqlite method) (dsi.core.Terminal method) (dsi.dsi.DSI method) summary_helper() (dsi.backends.duckdb.DuckDB method) (dsi.backends.sqlite.Sqlite method) Sync (class in dsi.sync) SystemKernel (class in dsi.plugins.env) SystemKernelModel (class in dsi.plugins.plugin_models)

T

Table_Plot (class in dsi.plugins.file_writer) table_print_helper() (dsi.core.Terminal method) Terminal (class in dsi.core)

TOML (class in dsi.plugins.file_reader) TOML1 (class in dsi.plugins.file_reader) transload() (dsi.core.Terminal method)

U

unload_module() (dsi.core.Terminal method)

update() (dsi.dsi.DSI method) update_abstraction() (dsi.core.Terminal method)

V

validate_connection() (dsi.backends.denodo.Denodo method) (dsi.backends.ndp.NDP method) (dsi.backends.oceans11.Oceans11 method) (dsi.backends.osti.OSTI method) (dsi.backends.rcsbpdb.RCSBPDB method) (dsi.backends.zenodo.Zenodo method)

validate_urls() (dsi.backends.ndp.NDP method) (dsi.backends.osti.OSTI method) version() (dsi.dsi.DSI method)

W

write() (dsi.dsi.DSI method)

Y

YAML (class in dsi.plugins.file_reader)

YAML1 (class in dsi.plugins.file_reader)

Z

Zenodo (class in dsi.backends.zenodo)